Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tp53P02340 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.61□□□□□ -0.23
Tp53P02340 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tp53P02340 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.61□□□□□ -0.23
Tp53P02340 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tp53P02340 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Tp53P02340 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.6□□□□□ -0.23
Tp53P02340 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.6□□□□□ -0.23
Tp53P02340 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Gm13342-201ENSMUST00000121055 207 ntBASIC13.6□□□□□ -0.23
Tp53P02340 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.6□□□□□ -0.23
Tp53P02340 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.6□□□□□ -0.23
Tp53P02340 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Gm9022-201ENSMUST00000182482 992 ntBASIC13.6□□□□□ -0.23
Tp53P02340 Gm43133-201ENSMUST00000197472 463 ntBASIC13.6□□□□□ -0.23
Tp53P02340 Gm44405-201ENSMUST00000198952 126 ntBASIC13.6□□□□□ -0.23
Tp53P02340 Gm43118-201ENSMUST00000199149 775 ntBASIC13.6□□□□□ -0.23
Tp53P02340 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.6□□□□□ -0.23
Tp53P02340 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tp53P02340 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.6□□□□□ -0.23
Tp53P02340 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.59□□□□□ -0.23
Tp53P02340 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tp53P02340 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Tp53P02340 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tp53P02340 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Tp53P02340 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.59□□□□□ -0.23
Tp53P02340 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Tp53P02340 Gm18304-201ENSMUST00000189162 546 ntBASIC13.59□□□□□ -0.23
Tp53P02340 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Gm18054-201ENSMUST00000207539 555 ntBASIC13.59□□□□□ -0.23
Tp53P02340 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tp53P02340 Gm45925-201ENSMUST00000218882 744 ntBASIC13.59□□□□□ -0.23
Tp53P02340 Gm9257-201ENSMUST00000221254 232 ntBASIC13.59□□□□□ -0.23
Tp53P02340 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Tp53P02340 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tp53P02340 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.59□□□□□ -0.23
Tp53P02340 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Tp53P02340 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Tp53P02340 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Tp53P02340 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tp53P02340 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.58□□□□□ -0.24
Tp53P02340 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tp53P02340 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms