Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.2□□□□□ -0.94
TcraP01849 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
TcraP01849 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
TcraP01849 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.2□□□□□ -0.94
TcraP01849 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.2□□□□□ -0.94
TcraP01849 Gm24420-201ENSMUST00000176676 59 ntBASIC9.2□□□□□ -0.94
TcraP01849 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TcraP01849 Gm3436-201ENSMUST00000179930 840 ntBASIC9.2□□□□□ -0.94
TcraP01849 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
TcraP01849 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Gm27533-201ENSMUST00000183800 152 ntBASIC9.2□□□□□ -0.94
TcraP01849 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TcraP01849 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.2□□□□□ -0.94
TcraP01849 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.2□□□□□ -0.94
TcraP01849 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.2□□□□□ -0.94
TcraP01849 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.2□□□□□ -0.94
TcraP01849 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TcraP01849 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.2□□□□□ -0.94
TcraP01849 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
TcraP01849 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TcraP01849 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.2□□□□□ -0.94
TcraP01849 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TcraP01849 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
TcraP01849 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
TcraP01849 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
TcraP01849 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
TcraP01849 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.19□□□□□ -0.94
TcraP01849 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
TcraP01849 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
TcraP01849 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Gm17837-201ENSMUST00000186435 985 ntBASIC9.19□□□□□ -0.94
TcraP01849 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
TcraP01849 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.19□□□□□ -0.94
TcraP01849 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.19□□□□□ -0.94
TcraP01849 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
TcraP01849 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.19□□□□□ -0.94
TcraP01849 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
TcraP01849 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.19□□□□□ -0.94
TcraP01849 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
TcraP01849 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.19□□□□□ -0.94
TcraP01849 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.19□□□□□ -0.94
TcraP01849 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
TcraP01849 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TcraP01849 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms