Protein–RNA interactions for Protein: P01801

Ig heavy chain V-III region J606, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01801 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.19□□□□□ -0.78
P01801 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
P01801 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
P01801 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01801 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.18□□□□□ -0.78
P01801 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.18□□□□□ -0.78
P01801 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01801 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
P01801 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.18□□□□□ -0.78
P01801 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.18□□□□□ -0.78
P01801 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01801 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.18□□□□□ -0.78
P01801 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
P01801 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.18□□□□□ -0.78
P01801 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.18□□□□□ -0.78
P01801 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
P01801 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
P01801 Snord83b-201ENSMUST00000104546 94 ntBASIC10.18□□□□□ -0.78
P01801 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
P01801 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.18□□□□□ -0.78
P01801 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P01801 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.18□□□□□ -0.78
P01801 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.18□□□□□ -0.78
P01801 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.18□□□□□ -0.78
P01801 Gm13665-201ENSMUST00000120830 528 ntBASIC10.18□□□□□ -0.78
P01801 Gm12291-201ENSMUST00000121627 311 ntBASIC10.18□□□□□ -0.78
P01801 Gm15547-201ENSMUST00000122152 333 ntBASIC10.18□□□□□ -0.78
P01801 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.18□□□□□ -0.78
P01801 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.18□□□□□ -0.78
P01801 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.18□□□□□ -0.78
P01801 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
P01801 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.18□□□□□ -0.78
P01801 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.18□□□□□ -0.78
P01801 Gm26461-201ENSMUST00000175064 290 ntBASIC10.18□□□□□ -0.78
P01801 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
P01801 Gm27023-201ENSMUST00000182372 285 ntBASIC10.18□□□□□ -0.78
P01801 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.18□□□□□ -0.78
P01801 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.18□□□□□ -0.78
P01801 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.18□□□□□ -0.78
P01801 Gm18212-201ENSMUST00000211678 889 ntBASIC10.18□□□□□ -0.78
P01801 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.18□□□□□ -0.78
P01801 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.18□□□□□ -0.78
P01801 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
P01801 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01801 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01801 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01801 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01801 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
P01801 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01801 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01801 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms