Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Vti1aO89116 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Vti1aO89116 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.6□□□□□ -0.23
Vti1aO89116 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.6□□□□□ -0.23
Vti1aO89116 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vti1aO89116 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Gm23270-201ENSMUST00000104055 131 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Gm14017-201ENSMUST00000121934 386 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Vti1aO89116 Gm22121-201ENSMUST00000175148 54 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.6□□□□□ -0.23
Vti1aO89116 Gm43138-201ENSMUST00000199123 708 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Gm44967-201ENSMUST00000207047 631 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1aO89116 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vti1aO89116 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.6□□□□□ -0.23
Vti1aO89116 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vti1aO89116 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Vti1aO89116 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.59□□□□□ -0.23
Vti1aO89116 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.59□□□□□ -0.23
Vti1aO89116 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.59□□□□□ -0.23
Vti1aO89116 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Gm14277-201ENSMUST00000121195 360 ntBASIC13.59□□□□□ -0.23
Vti1aO89116 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Vti1aO89116 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.59□□□□□ -0.23
Vti1aO89116 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.59□□□□□ -0.23
Vti1aO89116 Gm18212-201ENSMUST00000211678 889 ntBASIC13.59□□□□□ -0.23
Vti1aO89116 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vti1aO89116 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vti1aO89116 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1aO89116 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms