Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.69□□□□□ -0.38
Chrna4O70174 Gm14127-201ENSMUST00000117906 678 ntBASIC12.69□□□□□ -0.38
Chrna4O70174 Gm11597-201ENSMUST00000121423 964 ntBASIC12.69□□□□□ -0.38
Chrna4O70174 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.69□□□□□ -0.38
Chrna4O70174 Rmrp-201ENSMUST00000157463 271 ntBASIC12.69□□□□□ -0.38
Chrna4O70174 Gm37424-201ENSMUST00000191727 561 ntBASIC12.69□□□□□ -0.38
Chrna4O70174 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.69□□□□□ -0.38
Chrna4O70174 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.69□□□□□ -0.38
Chrna4O70174 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.69□□□□□ -0.38
Chrna4O70174 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chrna4O70174 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Chrna4O70174 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chrna4O70174 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Gm12957-201ENSMUST00000117835 377 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Gm24548-201ENSMUST00000158650 108 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Gm8018-201ENSMUST00000173536 789 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.68□□□□□ -0.38
Chrna4O70174 Gm19184-201ENSMUST00000196798 928 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.68□□□□□ -0.38
Chrna4O70174 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Chrna4O70174 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.68□□□□□ -0.38
Chrna4O70174 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chrna4O70174 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chrna4O70174 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.67□□□□□ -0.38
Chrna4O70174 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chrna4O70174 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.67□□□□□ -0.38
Chrna4O70174 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm13315-201ENSMUST00000120376 991 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm8062-201ENSMUST00000139696 444 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Gm13316-201ENSMUST00000140537 691 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms