Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ChkaO54804 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.72□□□□□ -0.37
ChkaO54804 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.72□□□□□ -0.37
ChkaO54804 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.72□□□□□ -0.37
ChkaO54804 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ChkaO54804 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.71□□□□□ -0.37
ChkaO54804 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ChkaO54804 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ChkaO54804 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.71□□□□□ -0.37
ChkaO54804 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.71□□□□□ -0.37
ChkaO54804 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Gm24644-201ENSMUST00000157114 139 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.71□□□□□ -0.37
ChkaO54804 Gm27839-201ENSMUST00000184242 106 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Gm38092-201ENSMUST00000195600 653 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Gm19184-201ENSMUST00000196798 928 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Gm7561-201ENSMUST00000211203 886 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.71□□□□□ -0.37
ChkaO54804 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ChkaO54804 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ChkaO54804 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ChkaO54804 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.71□□□□□ -0.38
ChkaO54804 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ChkaO54804 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ChkaO54804 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ChkaO54804 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.7□□□□□ -0.38
ChkaO54804 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.7□□□□□ -0.38
ChkaO54804 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.7□□□□□ -0.38
ChkaO54804 Gm9002-201ENSMUST00000178437 499 ntBASIC12.7□□□□□ -0.38
ChkaO54804 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ChkaO54804 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.7□□□□□ -0.38
ChkaO54804 Gm4768-201ENSMUST00000206199 686 ntBASIC12.7□□□□□ -0.38
ChkaO54804 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.7□□□□□ -0.38
ChkaO54804 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.7□□□□□ -0.38
ChkaO54804 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.7□□□□□ -0.38
ChkaO54804 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms