Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Npc1O35604 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Gm13342-201ENSMUST00000121055 207 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.3□□□□□ -0.44
Npc1O35604 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.3□□□□□ -0.44
Npc1O35604 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Gm38158-201ENSMUST00000194617 339 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.3□□□□□ -0.44
Npc1O35604 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Gm45930-201ENSMUST00000221330 292 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Mir339-201ENSMUST00000083659 96 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.3□□□□□ -0.44
Npc1O35604 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npc1O35604 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Npc1O35604 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Npc1O35604 Gm13813-201ENSMUST00000120998 787 ntBASIC12.29□□□□□ -0.44
Npc1O35604 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.29□□□□□ -0.44
Npc1O35604 Gm43822-201ENSMUST00000200285 476 ntBASIC12.29□□□□□ -0.44
Npc1O35604 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.29□□□□□ -0.44
Npc1O35604 Gm21769-201ENSMUST00000211922 111 ntBASIC12.29□□□□□ -0.44
Npc1O35604 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.29□□□□□ -0.44
Npc1O35604 Gm8227-201ENSMUST00000223306 571 ntBASIC12.29□□□□□ -0.44
Npc1O35604 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.29□□□□□ -0.44
Npc1O35604 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Npc1O35604 Olfr582-201ENSMUST00000098212 960 ntBASIC12.29□□□□□ -0.44
Npc1O35604 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Npc1O35604 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
Npc1O35604 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Npc1O35604 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Npc1O35604 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npc1O35604 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.28□□□□□ -0.44
Npc1O35604 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Npc1O35604 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npc1O35604 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Npc1O35604 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Npc1O35604 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Npc1O35604 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Npc1O35604 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms