Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Gm16202-201ENSMUST00000117532 544 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.95□□□□□ -0.82
Efnb3O35393 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Efnb3O35393 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.95□□□□□ -0.82
Efnb3O35393 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.95□□□□□ -0.82
Efnb3O35393 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 Gm6218-201ENSMUST00000219812 628 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
Efnb3O35393 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.94□□□□□ -0.82
Efnb3O35393 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.94□□□□□ -0.82
Efnb3O35393 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.94□□□□□ -0.82
Efnb3O35393 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Efnb3O35393 Gm2423-201ENSMUST00000074863 733 ntBASIC9.94□□□□□ -0.82
Efnb3O35393 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.94□□□□□ -0.82
Efnb3O35393 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Efnb3O35393 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Efnb3O35393 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.94□□□□□ -0.82
Efnb3O35393 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Efnb3O35393 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms