Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Gm8805-201ENSMUST00000117848 313 ntBASIC11.23□□□□□ -0.61
Alx4O35137 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.23□□□□□ -0.61
Alx4O35137 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Alx4O35137 Gm20949-201ENSMUST00000206478 952 ntBASIC11.23□□□□□ -0.61
Alx4O35137 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.23□□□□□ -0.61
Alx4O35137 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Alx4O35137 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.23□□□□□ -0.61
Alx4O35137 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx4O35137 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx4O35137 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Alx4O35137 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Alx4O35137 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.22□□□□□ -0.61
Alx4O35137 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.22□□□□□ -0.61
Alx4O35137 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.22□□□□□ -0.61
Alx4O35137 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Alx4O35137 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.22□□□□□ -0.61
Alx4O35137 Gm6218-201ENSMUST00000219812 628 ntBASIC11.22□□□□□ -0.61
Alx4O35137 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.22□□□□□ -0.61
Alx4O35137 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.22□□□□□ -0.61
Alx4O35137 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Alx4O35137 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx4O35137 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.22□□□□□ -0.61
Alx4O35137 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Alx4O35137 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.21□□□□□ -0.61
Alx4O35137 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Alx4O35137 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Alx4O35137 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms