Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Gm3052-202ENSMUST00000188254 2224 ntBASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc180J3QNE4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gm12899-201ENSMUST00000120565 551 ntBASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gm7722-201ENSMUST00000120646 741 ntBASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gm43520-201ENSMUST00000197996 164 ntBASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gm9797-202ENSMUST00000218003 294 ntBASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc180J3QNE4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Gm6485-201ENSMUST00000160676 439 ntBASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Gm37246-201ENSMUST00000192665 835 ntBASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc180J3QNE4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Gm7666-201ENSMUST00000146631 819 ntBASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Gm23045-201ENSMUST00000175041 96 ntBASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Gm37131-201ENSMUST00000192502 1561 ntBASIC22.57■■□□□ 1.2
Ccdc180J3QNE4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gm18227-201ENSMUST00000211082 1468 ntBASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gm8731-201ENSMUST00000118088 412 ntBASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Mir8115-201ENSMUST00000184992 119 ntBASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gm43058-201ENSMUST00000197645 625 ntBASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc180J3QNE4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms