Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.07■□□□□ 0
Ube4aE9Q735 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ube4aE9Q735 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.07■□□□□ 0
Ube4aE9Q735 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.07■□□□□ 0
Ube4aE9Q735 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ube4aE9Q735 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.06■□□□□ 0
Ube4aE9Q735 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.06■□□□□ 0
Ube4aE9Q735 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.06■□□□□ 0
Ube4aE9Q735 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm43962-201ENSMUST00000203898 190 ntBASIC15.06■□□□□ 0
Ube4aE9Q735 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.06■□□□□ 0
Ube4aE9Q735 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.06■□□□□ 0
Ube4aE9Q735 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.06■□□□□ 0
Ube4aE9Q735 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.06■□□□□ 0
Ube4aE9Q735 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ube4aE9Q735 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ube4aE9Q735 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.05■□□□□ 0
Ube4aE9Q735 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ube4aE9Q735 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.05■□□□□ 0
Ube4aE9Q735 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ube4aE9Q735 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ube4aE9Q735 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Ube4aE9Q735 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ube4aE9Q735 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.05■□□□□ 0
Ube4aE9Q735 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.05■□□□□ -0
Ube4aE9Q735 Gm14263-201ENSMUST00000117955 746 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.05■□□□□ -0
Ube4aE9Q735 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.05■□□□□ -0
Ube4aE9Q735 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Gm18038-201ENSMUST00000197900 485 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.05■□□□□ -0
Ube4aE9Q735 Gm8959-201ENSMUST00000213150 571 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.05■□□□□ -0
Ube4aE9Q735 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ube4aE9Q735 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ube4aE9Q735 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.05■□□□□ -0
Ube4aE9Q735 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ube4aE9Q735 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ube4aE9Q735 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.04■□□□□ -0
Ube4aE9Q735 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ube4aE9Q735 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Gm11450-201ENSMUST00000121144 333 ntBASIC15.04■□□□□ -0
Ube4aE9Q735 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ube4aE9Q735 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.04■□□□□ -0
Ube4aE9Q735 Gm44100-201ENSMUST00000204329 436 ntBASIC15.04■□□□□ -0
Ube4aE9Q735 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.04■□□□□ -0
Ube4aE9Q735 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.04■□□□□ -0
Ube4aE9Q735 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms