Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scaf11E9PZM7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm22711-201ENSMUST00000116890 133 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm8731-201ENSMUST00000118088 412 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm45575-201ENSMUST00000210283 548 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm45594-201ENSMUST00000211717 241 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Gm45856-201ENSMUST00000212752 416 ntBASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scaf11E9PZM7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Gm5257-201ENSMUST00000121823 790 ntBASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Gm3551-201ENSMUST00000190750 664 ntBASIC17.28■□□□□ 0.36
Scaf11E9PZM7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Gm9797-202ENSMUST00000218003 294 ntBASIC17.28■□□□□ 0.36
Scaf11E9PZM7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scaf11E9PZM7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm22920-201ENSMUST00000102175 109 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm25063-201ENSMUST00000104666 94 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm11663-201ENSMUST00000117888 290 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm11422-201ENSMUST00000118925 1103 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm7959-201ENSMUST00000221823 1078 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 AC134860.1-201ENSMUST00000224867 660 ntBASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scaf11E9PZM7 Gm42941-201ENSMUST00000200347 1321 ntBASIC17.27■□□□□ 0.35
Scaf11E9PZM7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Scaf11E9PZM7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scaf11E9PZM7 Grk6-205ENSMUST00000224653 2976 ntBASIC17.27■□□□□ 0.35
Scaf11E9PZM7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms