Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm34391-201ENSMUST00000203706 907 ntBASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Mir7071-201ENSMUST00000184847 69 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Gm7461-201ENSMUST00000058918 827 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Gm15590-201ENSMUST00000078419 552 ntBASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx6-2D3Z4R4 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx6-2D3Z4R4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gm13597-201ENSMUST00000121239 375 ntBASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.14□□□□□ -0.79
Nkx6-2D3Z4R4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms