Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm15004-201ENSMUST00000119192 630 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm17877-201ENSMUST00000192578 814 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Gm45120-201ENSMUST00000208880 408 ntBASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hfm1D3Z4R1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Gm24844-201ENSMUST00000158679 127 ntBASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Gm18367-201ENSMUST00000176139 600 ntBASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 AC156501.1-201ENSMUST00000228219 270 ntBASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 n-R5s211-201ENSMUST00000093689 119 ntBASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hfm1D3Z4R1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm42840-201ENSMUST00000200303 2251 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm11801-201ENSMUST00000117807 746 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm12990-201ENSMUST00000120372 468 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm14219-201ENSMUST00000120414 288 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 AC154257.1-202ENSMUST00000224729 843 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hfm1D3Z4R1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm26013-201ENSMUST00000104404 119 ntBASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm20392-201ENSMUST00000173047 701 ntBASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm9139-201ENSMUST00000218817 700 ntBASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 AC122350.1-201ENSMUST00000228135 533 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms