Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Chd6A3KFM7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.11□□□□□ -0.79
Chd6A3KFM7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Gm38135-201ENSMUST00000195068 502 ntBASIC10.11□□□□□ -0.79
Chd6A3KFM7 Gm43184-201ENSMUST00000197247 542 ntBASIC10.11□□□□□ -0.79
Chd6A3KFM7 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.11□□□□□ -0.79
Chd6A3KFM7 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.11□□□□□ -0.79
Chd6A3KFM7 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd6A3KFM7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Mir705-201ENSMUST00000102058 82 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm8343-201ENSMUST00000182705 994 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm18776-201ENSMUST00000188833 654 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.1□□□□□ -0.79
Chd6A3KFM7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd6A3KFM7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.09□□□□□ -0.79
Chd6A3KFM7 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm43726-201ENSMUST00000199110 775 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm30055-201ENSMUST00000203175 803 ntBASIC10.09□□□□□ -0.79
Chd6A3KFM7 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms