Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm8602-201ENSMUST00000184045 607 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.11□□□□□ -0.47
Cldn9Q9Z0S7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms