Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3aQ9JKX8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm37489-201ENSMUST00000191883 159 ntBASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Upk3aQ9JKX8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm11531-201ENSMUST00000117614 555 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm13570-201ENSMUST00000140763 309 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm25043-201ENSMUST00000158604 212 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm27023-201ENSMUST00000182372 285 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm27516-201ENSMUST00000184237 98 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Mir8109-201ENSMUST00000184375 117 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms