Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-4Q9EQM3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm13809-201ENSMUST00000117921 597 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm22138-201ENSMUST00000158748 128 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Mir7076-201ENSMUST00000183519 74 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm43184-201ENSMUST00000197247 542 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.89□□□□□ -0.35
Nkx2-4Q9EQM3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms