Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Gm9257-201ENSMUST00000221254 232 ntBASIC16.56■□□□□ 0.24
U2af1Q9D883 Gm10076-201ENSMUST00000073238 384 ntBASIC16.56■□□□□ 0.24
U2af1Q9D883 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Gm24231-201ENSMUST00000104315 133 ntBASIC16.55■□□□□ 0.24
U2af1Q9D883 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Gm12314-201ENSMUST00000118104 538 ntBASIC16.55■□□□□ 0.24
U2af1Q9D883 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.55■□□□□ 0.24
U2af1Q9D883 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
U2af1Q9D883 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
U2af1Q9D883 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.55■□□□□ 0.24
U2af1Q9D883 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
U2af1Q9D883 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm13570-201ENSMUST00000140763 309 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm9022-201ENSMUST00000182482 992 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm38241-201ENSMUST00000192641 898 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm6082-201ENSMUST00000215204 454 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.54■□□□□ 0.24
U2af1Q9D883 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.54■□□□□ 0.24
U2af1Q9D883 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
U2af1Q9D883 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
U2af1Q9D883 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
U2af1Q9D883 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.53■□□□□ 0.24
U2af1Q9D883 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.53■□□□□ 0.24
U2af1Q9D883 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Gm26083-201ENSMUST00000157904 193 ntBASIC16.53■□□□□ 0.24
U2af1Q9D883 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.53■□□□□ 0.24
U2af1Q9D883 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Gm8712-201ENSMUST00000221090 701 ntBASIC16.53■□□□□ 0.24
U2af1Q9D883 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms