Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc130Q9D516 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm16202-201ENSMUST00000117532 544 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm13612-201ENSMUST00000119276 390 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm12490-201ENSMUST00000120255 560 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm44069-201ENSMUST00000204898 506 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm7287-201ENSMUST00000205267 602 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm8598-201ENSMUST00000221184 836 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc130Q9D516 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccdc130Q9D516 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Gm11978-201ENSMUST00000122315 466 ntBASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc130Q9D516 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 1235 ms