Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Gm37905-201ENSMUST00000195310 341 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm24934-201ENSMUST00000103764 111 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm25951-201ENSMUST00000175330 64 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm3332-201ENSMUST00000189337 928 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldnd1Q9CQX5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm23153-201ENSMUST00000175323 313 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm8100-201ENSMUST00000182906 988 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm18304-201ENSMUST00000189162 546 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm5455-201ENSMUST00000058710 715 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gm10288-201ENSMUST00000084614 537 ntBASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms