Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
2210010C04RikQ9CPN9 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm11918-201ENSMUST00000121660 179 ntBASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
2210010C04RikQ9CPN9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Gm16202-201ENSMUST00000117532 544 ntBASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Gm12490-201ENSMUST00000120255 560 ntBASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.9□□□□□ -0.66
2210010C04RikQ9CPN9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms