Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Mir3081-201ENSMUST00000175305 84 ntBASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Gm10576-201ENSMUST00000191927 825 ntBASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2a1Q99PM3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm10231-201ENSMUST00000181584 441 ntBASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm10175-202ENSMUST00000208752 441 ntBASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Gm42602-201ENSMUST00000200288 3224 ntBASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2a1Q99PM3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Gm17980-201ENSMUST00000217977 2349 ntBASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Olfr129-201ENSMUST00000122318 993 ntBASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2a1Q99PM3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms