Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msh4Q99MT2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.29□□□□□ -0.44
Msh4Q99MT2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gm25927-201ENSMUST00000175058 117 ntBASIC12.29□□□□□ -0.44
Msh4Q99MT2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.29□□□□□ -0.44
Msh4Q99MT2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msh4Q99MT2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.28□□□□□ -0.44
Msh4Q99MT2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.28□□□□□ -0.44
Msh4Q99MT2 Gm37008-201ENSMUST00000195712 319 ntBASIC12.28□□□□□ -0.44
Msh4Q99MT2 Gm19184-201ENSMUST00000196798 928 ntBASIC12.28□□□□□ -0.44
Msh4Q99MT2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.28□□□□□ -0.44
Msh4Q99MT2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.28□□□□□ -0.44
Msh4Q99MT2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msh4Q99MT2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msh4Q99MT2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msh4Q99MT2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms