Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm28071-201ENSMUST00000190355 478 ntBASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm28693-202ENSMUST00000190758 331 ntBASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm45481-201ENSMUST00000209717 877 ntBASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm12058-201ENSMUST00000118614 437 ntBASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Trav11n-201ENSMUST00000200113 343 ntBASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col25a1Q99MQ5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Acot6-202ENSMUST00000222921 3622 ntBASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gm9136-201ENSMUST00000193368 454 ntBASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.06□□□□□ -0.32
Col25a1Q99MQ5 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms