Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf111Q99ML9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms