Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.09□□□□□ -0.63
Scrt1Q99M85 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Gm25700-201ENSMUST00000177693 110 ntBASIC11.09□□□□□ -0.63
Scrt1Q99M85 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Gm6458-201ENSMUST00000211573 635 ntBASIC11.09□□□□□ -0.63
Scrt1Q99M85 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Scrt1Q99M85 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Scrt1Q99M85 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Scrt1Q99M85 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Scrt1Q99M85 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.08□□□□□ -0.64
Scrt1Q99M85 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.08□□□□□ -0.64
Scrt1Q99M85 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Gm13875-201ENSMUST00000120162 282 ntBASIC11.08□□□□□ -0.64
Scrt1Q99M85 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Gm8385-201ENSMUST00000058999 643 ntBASIC11.08□□□□□ -0.64
Scrt1Q99M85 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.08□□□□□ -0.64
Scrt1Q99M85 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.08□□□□□ -0.64
Scrt1Q99M85 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms