Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm12196-201ENSMUST00000120954 262 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm25881-201ENSMUST00000157783 103 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm43930-201ENSMUST00000203868 845 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm1821-202ENSMUST00000227415 750 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.27□□□□□ -0.29
Clp1Q99LI9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clp1Q99LI9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm24934-201ENSMUST00000103764 111 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm23596-201ENSMUST00000104304 132 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm12029-201ENSMUST00000120073 832 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clp1Q99LI9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Gm5733-201ENSMUST00000190232 939 ntBASIC13.25□□□□□ -0.29
Clp1Q99LI9 Gm43058-201ENSMUST00000197645 625 ntBASIC13.25□□□□□ -0.29
Clp1Q99LI9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clp1Q99LI9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.25□□□□□ -0.29
Clp1Q99LI9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms