Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.2□□□□□ -0.46
Cstf3Q99LI7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Snord83b-201ENSMUST00000104546 94 ntBASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gm4768-201ENSMUST00000206199 686 ntBASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cstf3Q99LI7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 149.6 ms