Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clip1Q922J3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC19.62■□□□□ 0.73
Clip1Q922J3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC19.62■□□□□ 0.73
Clip1Q922J3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clip1Q922J3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip1Q922J3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12616-201ENSMUST00000118594 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 H2-Q3-201ENSMUST00000172583 608 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12624-201ENSMUST00000177615 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12621-201ENSMUST00000177760 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12615-201ENSMUST00000177970 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12622-201ENSMUST00000177975 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12627-201ENSMUST00000178412 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12625-201ENSMUST00000179122 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12614-201ENSMUST00000179586 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm12613-201ENSMUST00000180323 382 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm5455-201ENSMUST00000058710 715 ntBASIC19.61■□□□□ 0.73
Clip1Q922J3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip1Q922J3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC19.61■□□□□ 0.73
Clip1Q922J3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm5525-201ENSMUST00000190438 1312 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm13408-201ENSMUST00000119822 798 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm11941-201ENSMUST00000119904 610 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm13935-201ENSMUST00000121859 798 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC19.6■□□□□ 0.73
Clip1Q922J3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC19.6■□□□□ 0.73
Clip1Q922J3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Clip1Q922J3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip1Q922J3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC19.59■□□□□ 0.73
Clip1Q922J3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Clip1Q922J3 Gm9550-201ENSMUST00000161130 862 ntBASIC19.59■□□□□ 0.73
Clip1Q922J3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Gm7467-201ENSMUST00000185173 652 ntBASIC19.59■□□□□ 0.73
Clip1Q922J3 AC154276.3-201ENSMUST00000227643 998 ntBASIC19.59■□□□□ 0.73
Clip1Q922J3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC19.59■□□□□ 0.73
Clip1Q922J3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Gm43721-201ENSMUST00000199677 2313 ntBASIC19.59■□□□□ 0.73
Clip1Q922J3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Clip1Q922J3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clip1Q922J3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC19.59■□□□□ 0.73
Clip1Q922J3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip1Q922J3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms