Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm8598-201ENSMUST00000221184 836 ntBASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Gm8805-201ENSMUST00000117848 313 ntBASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Gm13123-201ENSMUST00000122173 492 ntBASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga11Q91XY8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga11Q91XY8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms