Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm13316-201ENSMUST00000140537 691 ntBASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx41Q91VN6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Gm12502-201ENSMUST00000120197 444 ntBASIC14.48□□□□□ -0.09
Ddx41Q91VN6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Gm21769-201ENSMUST00000211922 111 ntBASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Morn2-202ENSMUST00000227729 656 ntBASIC14.48□□□□□ -0.09
Ddx41Q91VN6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ddx41Q91VN6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms