Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm24231-201ENSMUST00000104315 133 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm6963-201ENSMUST00000147879 379 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm26461-201ENSMUST00000175064 290 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm19187-201ENSMUST00000206781 892 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TraipQ8VIG6 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.48□□□□□ -0.25
TraipQ8VIG6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Acot6-202ENSMUST00000222921 3622 ntBASIC13.47□□□□□ -0.25
TraipQ8VIG6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm11893-201ENSMUST00000117829 491 ntBASIC13.47□□□□□ -0.25
TraipQ8VIG6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm44651-201ENSMUST00000207343 372 ntBASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TraipQ8VIG6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TraipQ8VIG6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm4909-201ENSMUST00000118749 794 ntBASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 177.1 ms