Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.03□□□□□ -0.32
Trim60Q8VI40 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim60Q8VI40 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.03□□□□□ -0.32
Trim60Q8VI40 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim60Q8VI40 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim60Q8VI40 Daam2-202ENSMUST00000224595 1926 ntBASIC13.02□□□□□ -0.32
Trim60Q8VI40 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm15703-201ENSMUST00000120250 880 ntBASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm14760-201ENSMUST00000121831 999 ntBASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm5745-201ENSMUST00000183748 313 ntBASIC13.02□□□□□ -0.33
Trim60Q8VI40 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm8515-201ENSMUST00000194852 576 ntBASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm37497-201ENSMUST00000195830 798 ntBASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim60Q8VI40 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Pck2-205ENSMUST00000226352 2784 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Gm12384-201ENSMUST00000119228 919 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Gm12091-201ENSMUST00000146791 830 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.01□□□□□ -0.33
Trim60Q8VI40 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms