Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup58Q8R332 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup58Q8R332 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.53□□□□□ -0.24
Nup58Q8R332 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.53□□□□□ -0.24
Nup58Q8R332 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup58Q8R332 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Nup58Q8R332 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Nup58Q8R332 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup58Q8R332 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup58Q8R332 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.52□□□□□ -0.24
Nup58Q8R332 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nup58Q8R332 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup58Q8R332 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup58Q8R332 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.52□□□□□ -0.24
Nup58Q8R332 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Gm6152-201ENSMUST00000151704 340 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Gm8652-201ENSMUST00000181363 964 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Gm38671-201ENSMUST00000200573 130 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Daam2-202ENSMUST00000224595 1926 ntBASIC13.52□□□□□ -0.25
Nup58Q8R332 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup58Q8R332 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup58Q8R332 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup58Q8R332 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup58Q8R332 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Gm28693-202ENSMUST00000190758 331 ntBASIC13.51□□□□□ -0.25
Nup58Q8R332 Gm18473-201ENSMUST00000220543 868 ntBASIC13.51□□□□□ -0.25
Nup58Q8R332 Mir339-201ENSMUST00000083659 96 ntBASIC13.51□□□□□ -0.25
Nup58Q8R332 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup58Q8R332 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.51□□□□□ -0.25
Nup58Q8R332 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nup58Q8R332 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.51□□□□□ -0.25
Nup58Q8R332 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup58Q8R332 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup58Q8R332 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup58Q8R332 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup58Q8R332 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup58Q8R332 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup58Q8R332 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms