Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.72□□□□□ -0.53
H2afjQ8R1M2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H2afjQ8R1M2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H2afjQ8R1M2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.71□□□□□ -0.53
H2afjQ8R1M2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afjQ8R1M2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afjQ8R1M2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afjQ8R1M2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afjQ8R1M2 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms