Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx54Q8K4L0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Gm24934-201ENSMUST00000103764 111 ntBASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Gm10731-201ENSMUST00000181171 448 ntBASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Gm18304-201ENSMUST00000189162 546 ntBASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx54Q8K4L0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Mir8115-201ENSMUST00000184992 119 ntBASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Gm17877-201ENSMUST00000192578 814 ntBASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Gm35713-201ENSMUST00000210516 199 ntBASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx54Q8K4L0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm14219-201ENSMUST00000120414 288 ntBASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm15595-201ENSMUST00000120840 961 ntBASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm43186-201ENSMUST00000198130 824 ntBASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx54Q8K4L0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms