Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.72□□□□□ -0.37
Clip4Q8CI96 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.72□□□□□ -0.37
Clip4Q8CI96 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.72□□□□□ -0.37
Clip4Q8CI96 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Gm37424-201ENSMUST00000191727 561 ntBASIC12.72□□□□□ -0.37
Clip4Q8CI96 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.72□□□□□ -0.37
Clip4Q8CI96 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip4Q8CI96 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Gm2231-201ENSMUST00000125661 612 ntBASIC12.71□□□□□ -0.37
Clip4Q8CI96 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.71□□□□□ -0.37
Clip4Q8CI96 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip4Q8CI96 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.71□□□□□ -0.37
Clip4Q8CI96 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip4Q8CI96 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.7□□□□□ -0.38
Clip4Q8CI96 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.7□□□□□ -0.38
Clip4Q8CI96 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Gm26927-201ENSMUST00000182385 965 ntBASIC12.7□□□□□ -0.38
Clip4Q8CI96 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.7□□□□□ -0.38
Clip4Q8CI96 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip4Q8CI96 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms