Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Paupar-201ENSMUST00000194826 3482 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm9022-201ENSMUST00000182482 992 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc5Q8CG46 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm19163-201ENSMUST00000223313 780 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm24526-201ENSMUST00000082921 158 ntBASIC15.55■□□□□ 0.08
Smc5Q8CG46 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc5Q8CG46 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.54■□□□□ 0.08
Smc5Q8CG46 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.54■□□□□ 0.08
Smc5Q8CG46 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.54■□□□□ 0.08
Smc5Q8CG46 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.54■□□□□ 0.08
Smc5Q8CG46 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Smc5Q8CG46 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Rmrp-201ENSMUST00000157463 271 ntBASIC15.53■□□□□ 0.08
Smc5Q8CG46 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Gm5866-201ENSMUST00000177881 973 ntBASIC15.53■□□□□ 0.08
Smc5Q8CG46 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.53■□□□□ 0.08
Smc5Q8CG46 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms