Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrif1Q8CDD9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrif1Q8CDD9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms