Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps53Q8CCB4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Vps53Q8CCB4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps53Q8CCB4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps53Q8CCB4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps53Q8CCB4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps53Q8CCB4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Gm22323-201ENSMUST00000103832 109 ntBASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Gm15370-201ENSMUST00000117158 253 ntBASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Gm14381-201ENSMUST00000122105 414 ntBASIC14.7□□□□□ -0.06
Vps53Q8CCB4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps53Q8CCB4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm24255-201ENSMUST00000104481 128 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm6023-201ENSMUST00000118217 606 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm2991-201ENSMUST00000173338 480 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm37489-201ENSMUST00000191883 159 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm6458-201ENSMUST00000211573 635 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Mir433-201ENSMUST00000093564 124 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps53Q8CCB4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Gm13297-201ENSMUST00000120205 934 ntBASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Gm6222-202ENSMUST00000182143 629 ntBASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms