Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm16372-201ENSMUST00000073088 450 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lysmd4Q8CC84 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm12384-201ENSMUST00000119228 919 ntBASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm12341-201ENSMUST00000119724 503 ntBASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm6152-201ENSMUST00000151704 340 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms