Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Usp44Q8C2S0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Usp44Q8C2S0 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.74□□□□□ -0.05
Usp44Q8C2S0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.74□□□□□ -0.05
Usp44Q8C2S0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm11531-201ENSMUST00000117614 555 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm14999-201ENSMUST00000121039 624 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm7399-201ENSMUST00000032395 858 ntBASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Usp44Q8C2S0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm15370-201ENSMUST00000117158 253 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm4986-201ENSMUST00000119731 549 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm9083-201ENSMUST00000120423 819 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm25043-201ENSMUST00000158604 212 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Mir8109-201ENSMUST00000184375 117 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm6007-201ENSMUST00000208170 823 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm18935-201ENSMUST00000212692 664 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp44Q8C2S0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Gm25214-201ENSMUST00000104573 129 ntBASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.71□□□□□ -0.05
Usp44Q8C2S0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp44Q8C2S0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms