Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm12453-201ENSMUST00000121981 331 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm17944-201ENSMUST00000186351 643 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm16071-201ENSMUST00000119589 793 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm13492-201ENSMUST00000119772 665 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm17826-201ENSMUST00000189720 798 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gm15889-202ENSMUST00000212669 2443 ntBASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd9Q8BYH8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Gm12196-201ENSMUST00000120954 262 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Gm6905-201ENSMUST00000205729 511 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 AC138716.2-201ENSMUST00000226670 1016 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Gm12030-201ENSMUST00000121917 223 ntBASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd9Q8BYH8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd9Q8BYH8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd9Q8BYH8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd9Q8BYH8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd9Q8BYH8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd9Q8BYH8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms