Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Gm5687-201ENSMUST00000118252 640 ntBASIC11.13□□□□□ -0.63
SprnQ8BWU1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.13□□□□□ -0.63
SprnQ8BWU1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Gm38223-201ENSMUST00000194484 695 ntBASIC11.13□□□□□ -0.63
SprnQ8BWU1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.13□□□□□ -0.63
SprnQ8BWU1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.13□□□□□ -0.63
SprnQ8BWU1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.13□□□□□ -0.63
SprnQ8BWU1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gm15806-201ENSMUST00000120696 955 ntBASIC11.12□□□□□ -0.63
SprnQ8BWU1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.12□□□□□ -0.63
SprnQ8BWU1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.12□□□□□ -0.63
SprnQ8BWU1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SprnQ8BWU1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SprnQ8BWU1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms