Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm15371-201ENSMUST00000117057 784 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm12490-201ENSMUST00000120255 560 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm8515-201ENSMUST00000194852 576 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm18018-201ENSMUST00000198273 408 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm6180-201ENSMUST00000065243 498 ntBASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf7Q8BTV2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm14127-201ENSMUST00000117906 678 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm45668-201ENSMUST00000211271 493 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms