Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gm18307-201ENSMUST00000206864 949 ntBASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Zc3hc1Q80YV2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Gm14921-201ENSMUST00000118643 908 ntBASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Gm12341-201ENSMUST00000119724 503 ntBASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Zc3hc1Q80YV2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm6152-201ENSMUST00000151704 340 ntBASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Mir6956-201ENSMUST00000183598 62 ntBASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm10576-201ENSMUST00000191927 825 ntBASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.53□□□□□ -0.56
Zc3hc1Q80YV2 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms