Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Mir433-201ENSMUST00000093564 124 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm28882-201ENSMUST00000185504 314 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 AA914427-201ENSMUST00000193194 1166 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm44967-201ENSMUST00000207047 631 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm10312-201ENSMUST00000078515 489 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ubfd1Q78JW9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Gm2383-201ENSMUST00000181461 807 ntBASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Gm39404-201ENSMUST00000216350 313 ntBASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms