Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Timd4Q6U7R4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Timd4Q6U7R4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm6023-201ENSMUST00000118217 606 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm14760-201ENSMUST00000121831 999 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm13316-201ENSMUST00000140537 691 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm45930-201ENSMUST00000221330 292 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Timd4Q6U7R4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gm6013-201ENSMUST00000212264 699 ntBASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Daam2-202ENSMUST00000224595 1926 ntBASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gm7399-201ENSMUST00000032395 858 ntBASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Timd4Q6U7R4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms