Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chd4Q6PDQ2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm8731-201ENSMUST00000118088 412 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm12899-201ENSMUST00000120565 551 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 AC132901.1-201ENSMUST00000224345 508 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm43807-201ENSMUST00000200678 1781 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm13263-201ENSMUST00000121271 838 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm23045-201ENSMUST00000175041 96 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm37458-201ENSMUST00000194055 410 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm45575-201ENSMUST00000210283 548 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd4Q6PDQ2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chd4Q6PDQ2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chd4Q6PDQ2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm4310-201ENSMUST00000177847 889 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm27438-201ENSMUST00000183480 110 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm43520-201ENSMUST00000197996 164 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm18893-201ENSMUST00000198416 943 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd4Q6PDQ2 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gm12419-201ENSMUST00000116649 636 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gm12029-201ENSMUST00000120073 832 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Mir8115-201ENSMUST00000184992 119 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms